Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | EEJ33_04640 | Not Available | + | 961659 - 962732 | 39739.6 |
| bifunctional chorismate mutase/prephenate dehydrogenase | EEJ33_04645 | Not Available | + | 962745 - 963872 | 42021.0 |
| pilz domain-containing protein | EEJ33_04650 | Not Available | - | 963939 - 964310 | 13945.8 |
| energy-dependent translational throttle protein etta | EEJ33_04655 | Not Available | - | 964482 - 966149 | 62502.5 |
| murein transglycosylase | EEJ33_04660 | Not Available | + | 966511 - 968457 | 74486.3 |
| trp operon repressor | EEJ33_04665 | Not Available | + | 968467 - 968823 | 13391.2 |
| non-canonical purine ntp phosphatase | EEJ33_04670 | Not Available | - | 968901 - 969452 | 20561.9 |
| ggdef and eal domain-containing protein | EEJ33_04675 | Not Available | - | 969373 - 971748 | 90716.4 |
| spermidine/putrescine abc transporter substrate-binding protein | EEJ33_04680 | Not Available | - | 971732 - 972772 | 39362.1 |
| prephenate dehydratase | EEJ33_04685 | Not Available | - | 972956 - 974131 | 44145.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


