Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae
Accession NumberRHPA00000000.1
Gene Summary
Adenine Count
1078901 bp
Thymine Count
1085544 bp
Guanine Count
974937 bp
Cytosine Count
970092 bp
Genome Length
4109474 bp
Protein-coding Genes
3598 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate-protein phosphotransferase ptsp | EEJ33_04535 | Not Available | + | 937606 - 939852 | 83586.4 |
| sulfite exporter taue/safe family protein | EEJ33_04540 | Not Available | + | 939862 - 940656 | 27737.3 |
| prolipoprotein diacylglyceryl transferase | EEJ33_04545 | Not Available | + | 940685 - 941500 | 30500.7 |
| thymidylate synthase | EEJ33_04550 | Not Available | + | 941510 - 942361 | 32560.8 |
| transcriptional activator nhar | EEJ33_04560 | Not Available | + | 943992 - 944882 | 33543.5 |
| arsr family transcriptional regulator | EEJ33_04565 | Not Available | + | 945106 - 945408 | 11436.0 |
| 30s ribosomal protein s20 | EEJ33_04570 | Not Available | - | 945476 - 945736 | 9510.75 |
| murein biosynthesis integral membrane protein murj | EEJ33_04575 | Not Available | + | 945979 - 947556 | 57281.8 |
| bifunctional riboflavin kinase/fad synthetase | EEJ33_04580 | Not Available | + | 947625 - 948593 | 35830.4 |
| isoleucine--trna ligase | EEJ33_04585 | Not Available | + | 948624 - 951473 | 105413.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


