Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio paracholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio paracholerae
Accession NumberMWFL00000000.1
Gene Summary
Adenine Count
1065144 bp
Thymine Count
1055989 bp
Guanine Count
940443 bp
Cytosine Count
965063 bp
Genome Length
4026639 bp
Protein-coding Genes
3657 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i oxidase subunit cydx | B7947_03370 | Not Available | - | 667281 - 667388 | 4119.06 |
| cytochrome d ubiquinol oxidase subunit ii | B7947_03375 | Not Available | - | 667401 - 668537 | 41639.3 |
| cytochrome d terminal oxidase subunit 1 | B7947_03380 | Not Available | - | 668555 - 670180 | 60557.8 |
| holliday junction branch migration dna helicase ruvb | B7947_03385 | Not Available | - | 670600 - 671604 | 37341.1 |
| holliday junction branch migration protein ruva | B7947_03390 | Not Available | - | 671660 - 672274 | 22065.1 |
| crossover junction endodeoxyribonuclease ruvc | B7947_03395 | Not Available | - | 672367 - 672888 | 18390.4 |
| cysteine--trna ligase | B7947_03400 | Not Available | - | 672976 - 674355 | 52073.4 |
| peptidylprolyl isomerase | B7947_03405 | Not Available | + | 674501 - 674995 | 18258.5 |
| eal domain-containing protein | B7947_03415 | Not Available | + | 675872 - 677086 | 45618.4 |
| hypothetical protein | B7947_03420 | Not Available | + | 677148 - 677603 | 17262.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation

