Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-formamidopyrimidine glycosylase | BC353_09325 | Not Available | + | 970089 - 970898 | 30038.4 |
| pantetheine-phosphate adenylyltransferase | BC353_09330 | Not Available | - | 970995 - 971489 | 18274.1 |
| adp-heptose--lps heptosyltransferase | BC353_09335 | Not Available | + | 971600 - 972637 | 38147.2 |
| glycosyltransferase | BC353_09340 | Not Available | - | 972698 - 973477 | 29961.7 |
| glycosyl transferase | BC353_09345 | Not Available | - | 973520 - 974587 | 39762.8 |
| 3-deoxy-d-manno-octulosonic acid kinase | BC353_09350 | Not Available | + | 974721 - 975431 | 27504.7 |
| wave lipopolysaccharide synthesis family protein | BC353_09355 | Not Available | - | 975428 - 976351 | 35784.7 |
| capsular biosynthesis protein | BC353_09360 | Not Available | - | 976348 - 977091 | 28331.5 |
| capsular biosynthesis protein | BC353_09365 | Not Available | - | 977088 - 978671 | 60014.8 |
| capsular biosynthesis protein | BC353_09370 | Not Available | - | 978662 - 979042 | 14636.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


