Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system impa domain-containing protein | BC353_09125 | Not Available | + | 911704 - 913113 | 53008.8 |
| type vi secretion protein icmf | BC353_09130 | Not Available | + | 913129 - 916674 | 134785.0 |
| type vi secretion protein | BC353_09135 | Not Available | + | 916725 - 917987 | 48102.4 |
| hypothetical protein | BC353_09140 | Not Available | + | 918038 - 918280 | 9043.04 |
| type vi secretion protein vgrg | BC353_09145 | Not Available | + | 918240 - 921317 | 113830.0 |
| hypothetical protein | BC353_09150 | Not Available | + | 921317 - 921766 | 16615.7 |
| hypothetical protein | BC353_09155 | Not Available | + | 921794 - 922759 | 37851.3 |
| hypothetical protein | BC353_09160 | Not Available | - | 922807 - 923067 | 9721.45 |
| hypothetical protein | BC353_09165 | Not Available | + | 923042 - 923251 | 8114.24 |
| d-ribose pyranase | BC353_09170 | Not Available | + | 923351 - 923770 | 15296.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


