Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysozyme | BC353_09075 | Not Available | + | 899536 - 899973 | 16435.7 |
| type vi secretion protein | BC353_09080 | Not Available | + | 899979 - 901748 | 67152.2 |
| hypothetical protein | BC353_09085 | Not Available | + | 901712 - 902728 | 38311.0 |
| hypothetical protein | BC353_09090 | Not Available | + | 902731 - 904215 | 54886.3 |
| type vi secretion system-associated lipoprotein | BC353_09095 | Not Available | + | 904218 - 904694 | 18334.8 |
| type vi secretion system-associated protein | BC353_09100 | Not Available | + | 904701 - 906035 | 50379.8 |
| type iv secretion protein dotu | BC353_09105 | Not Available | + | 906038 - 906811 | 29695.6 |
| clpv1 family t6ss atpase | BC353_09110 | Not Available | + | 906837 - 909446 | 96210.0 |
| aaa family atpase | BC353_09115 | Not Available | + | 909449 - 911041 | 59285.2 |
| type vi secretion system-associated protein | BC353_09120 | Not Available | + | 911038 - 911694 | 23588.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


