Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | BC353_09025 | Not Available | + | 887512 - 888552 | 39049.7 |
| sulfurtransferase | BC353_09030 | Not Available | - | 888589 - 888945 | 13114.6 |
| diguanylate phosphodiesterase | BC353_09035 | Not Available | - | 888960 - 890516 | 58797.9 |
| haloacid dehalogenase | BC353_09040 | Not Available | - | 890692 - 891342 | 23823.9 |
| sulfate permease | BC353_09045 | Not Available | + | 891541 - 893310 | 64114.0 |
| rna pseudouridine synthase | BC353_09050 | Not Available | - | 893352 - 895031 | 64126.9 |
| hypothetical protein | BC353_09055 | Not Available | + | 895803 - 896087 | 9212.88 |
| hypothetical protein | BC353_09060 | Not Available | + | 896155 - 897075 | 35411.8 |
| type vi secretion system-associated protein | BC353_09065 | Not Available | + | 897508 - 898014 | 18490.1 |
| type vi secretion protein | BC353_09070 | Not Available | + | 898058 - 899533 | 55482.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


