Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | BC353_08340 | Not Available | + | 714259 - 715179 | 34260.4 |
| hypothetical protein | BC353_08345 | Not Available | + | 715397 - 717379 | 73274.0 |
| sodium:alanine symporter | BC353_08350 | Not Available | - | 717459 - 719009 | 55444.0 |
| d-amino acid dehydrogenase small subunit | BC353_08355 | Not Available | - | 719376 - 720638 | 46169.7 |
| potassium transporter kef | BC353_08360 | Not Available | + | 720945 - 721922 | 36843.2 |
| 4,5-dioxygenase | BC353_08365 | Not Available | + | 722165 - 722494 | 12933.4 |
| hypothetical protein | BC353_08370 | Not Available | + | 722660 - 722932 | 10279.2 |
| transporter | BC353_08375 | Not Available | + | 723094 - 723492 | 14116.9 |
| rna methyltransferase | BC353_08380 | Not Available | + | 723607 - 724341 | 26131.6 |
| ferredoxin | BC353_08385 | Not Available | - | 724504 - 724827 | 11921.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


