Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BC353_08240 | Not Available | + | 690567 - 691181 | 22323.2 |
| outer membrane protein assembly factor bamb | BC353_08245 | Not Available | + | 691194 - 692354 | 41190.0 |
| ribosome biogenesis gtpase der | BC353_08250 | Not Available | + | 692547 - 694031 | 55613.8 |
| metal-dependent hydrolase | BC353_08255 | Not Available | + | 694085 - 694969 | 32733.6 |
| dna ligase | BC353_08260 | Not Available | + | 695274 - 695507 | 8611.09 |
| exodeoxyribonuclease vii large subunit | BC353_08265 | Not Available | - | 695488 - 696828 | 50440.8 |
| imp dehydrogenase | BC353_08270 | Not Available | + | 697037 - 698500 | 51691.4 |
| glutamine-hydrolyzing gmp synthase | BC353_08275 | Not Available | + | 698607 - 700160 | 57782.3 |
| carbohydrate-binding protein | BC353_08280 | Not Available | + | 700417 - 702120 | 62378.8 |
| hypothetical protein | BC353_08285 | Not Available | + | 702311 - 702904 | 21121.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


