Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co-chaperone hscb | BC353_08190 | Not Available | + | 680285 - 680800 | 19618.5 |
| fe-s protein assembly chaperone hsca | BC353_08195 | Not Available | + | 680824 - 682674 | 65778.5 |
| ferredoxin, 2fe-2s type, isc system | BC353_08200 | Not Available | + | 682688 - 683026 | 12335.5 |
| fe-s assembly protein iscx | BC353_08205 | Not Available | + | 683075 - 683269 | 7773.1 |
| aminopeptidase pepb | BC353_08210 | Not Available | + | 683489 - 684778 | 46733.7 |
| nucleoside-diphosphate kinase | BC353_08215 | Not Available | + | 684982 - 685410 | 15926.1 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | BC353_08220 | Not Available | + | 685584 - 686705 | 42095.8 |
| transcriptional regulator | BC353_08225 | Not Available | + | 687019 - 688101 | 38761.6 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BC353_08230 | Not Available | + | 688112 - 689236 | 40646.0 |
| histidine--trna ligase | BC353_08235 | Not Available | + | 689262 - 690530 | 46931.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


