Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | BC353_08140 | Not Available | + | 671258 - 672397 | 43255.9 |
| preprotein translocase subunit yajc | BC353_08145 | Not Available | + | 672502 - 672834 | 11917.8 |
| protein-export membrane protein secd | BC353_08150 | Not Available | + | 672889 - 674709 | 65345.7 |
| protein-export membrane protein secf | BC353_08155 | Not Available | + | 674724 - 675671 | 34347.2 |
| inositol monophosphatase | BC353_08160 | Not Available | - | 675839 - 676642 | 29089.9 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | BC353_08165 | Not Available | + | 676824 - 677555 | 26990.7 |
| fe-s cluster assembly transcriptional regulator iscr | BC353_08170 | Not Available | + | 677670 - 678191 | 18658.3 |
| cysteine desulfurase iscs | BC353_08175 | Not Available | + | 678218 - 679432 | 44843.7 |
| fe-s cluster assembly scaffold iscu | BC353_08180 | Not Available | + | 679469 - 679852 | 13662.2 |
| iron-sulfur cluster assembly protein isca | BC353_08185 | Not Available | + | 679913 - 680236 | 11717.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


