Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate transport system regulatory protein phou | BC353_08090 | Not Available | + | 660830 - 661540 | 26987.9 |
| polyphosphate kinase 2 | BC353_08095 | Not Available | - | 661601 - 662377 | 30627.9 |
| copper homeostasis protein cutc | BC353_08100 | Not Available | - | 662581 - 663345 | 27236.9 |
| peroxidase | BC353_08105 | Not Available | - | 663683 - 664288 | 22119.3 |
| lysr family transcriptional regulator | BC353_08110 | Not Available | + | 664510 - 665415 | 33795.2 |
| malate synthase a | BC353_08115 | Not Available | + | 665999 - 667636 | 61519.8 |
| isocitrate lyase | BC353_08120 | Not Available | + | 667766 - 669079 | 47982.3 |
| acetoin utilization protein acub | BC353_08125 | Not Available | - | 669232 - 669681 | 16593.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BC353_08130 | Not Available | + | 669971 - 671029 | 39490.2 |
| hypothetical protein | BC353_08135 | Not Available | - | 670984 - 671247 | 9815.07 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


