Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine--8-amino-7-oxononanoate transaminase | BC353_07830 | Not Available | + | 577262 - 578542 | 47186.9 |
| serine--trna ligase | BC353_07835 | Not Available | - | 578650 - 579957 | 48573.1 |
| recombination factor protein rara | BC353_07840 | Not Available | - | 580061 - 581410 | 49749.9 |
| outer membrane lipoprotein carrier protein lola | BC353_07845 | Not Available | - | 581435 - 582031 | 22316.2 |
| prepilin peptidase | BC353_07850 | Not Available | - | 582127 - 582747 | 22824.3 |
| trna dihydrouridine synthase dusc | BC353_07855 | Not Available | + | 582913 - 583884 | 36478.1 |
| diguanylate cyclase | BC353_07860 | Not Available | - | 583917 - 585386 | 55700.1 |
| abc transporter atp-binding protein | BC353_07865 | Not Available | - | 585554 - 586348 | 28742.2 |
| abc transporter permease | BC353_07870 | Not Available | - | 586345 - 587289 | 32411.5 |
| abc transporter substrate-binding protein | BC353_07875 | Not Available | - | 587404 - 588369 | 33283.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


