Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase (nadp(+)) | BC353_07680 | Not Available | - | 547200 - 549425 | 80509.1 |
| pseudouridine synthase | BC353_07685 | Not Available | + | 549735 - 550460 | 27020.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | BC353_07690 | Not Available | - | 550661 - 551293 | 23420.0 |
| imidazole glycerol phosphate synthase subunit hisf | BC353_07695 | Not Available | - | 551290 - 552063 | 28339.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | BC353_07700 | Not Available | - | 552045 - 552782 | 26387.5 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | BC353_07705 | Not Available | - | 552825 - 553436 | 22275.0 |
| bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase | BC353_07710 | Not Available | - | 553436 - 554509 | 39875.9 |
| histidinol-phosphate transaminase | BC353_07715 | Not Available | - | 554561 - 555601 | 38331.3 |
| histidinol dehydrogenase | BC353_07720 | Not Available | - | 555605 - 556900 | 46143.4 |
| atp phosphoribosyltransferase | BC353_07725 | Not Available | - | 556905 - 557801 | 32948.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


