Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BC353_07630 | Not Available | + | 535403 - 536308 | 32387.3 |
| hypothetical protein | BC353_07635 | Not Available | + | 536497 - 537006 | 19296.8 |
| glutamate decarboxylase | BC353_07640 | Not Available | + | 537116 - 538762 | 61581.4 |
| transcriptional regulator hexr | BC353_07645 | Not Available | + | 539070 - 539924 | 31526.9 |
| alcohol dehydrogenase | BC353_07650 | Not Available | - | 540015 - 541262 | 44744.5 |
| glutaredoxin | BC353_07655 | Not Available | + | 541571 - 541834 | 9881.76 |
| transporter | BC353_07660 | Not Available | + | 542036 - 543712 | 60507.1 |
| atp-dependent clp protease atp-binding subunit clpa | BC353_07665 | Not Available | - | 543778 - 546048 | 84028.7 |
| atp-dependent clp protease adapter clps | BC353_07670 | Not Available | - | 546087 - 546407 | 12314.8 |
| cold shock domain protein cspd | BC353_07675 | Not Available | + | 546880 - 547101 | 7947.32 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


