Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan glycosyltransferase ftsi | BC353_07475 | Not Available | + | 458515 - 460257 | 63223.4 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | BC353_07480 | Not Available | + | 460274 - 461761 | 53612.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BC353_07485 | Not Available | + | 461758 - 463119 | 47980.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | BC353_07490 | Not Available | + | 463116 - 464198 | 39821.9 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | BC353_07495 | Not Available | + | 464222 - 465544 | 47367.9 |
| cell division protein ftsw | BC353_07500 | Not Available | + | 465561 - 466757 | 43960.9 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | BC353_07505 | Not Available | + | 466744 - 467805 | 37834.2 |
| udp-n-acetylmuramate--l-alanine ligase | BC353_07510 | Not Available | + | 467819 - 469279 | 53062.6 |
| cell division protein ftsq | BC353_07515 | Not Available | + | 469461 - 470243 | 29771.8 |
| cell division protein ftsa | BC353_07520 | Not Available | + | 470236 - 471498 | 45574.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


