Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin fldb | BC353_07420 | Not Available | - | 444668 - 445186 | 19393.7 |
| site-specific tyrosine recombinase xerd | BC353_07425 | Not Available | + | 445324 - 446232 | 34566.7 |
| thiol:disulfide interchange protein | BC353_07430 | Not Available | + | 446249 - 447001 | 27394.1 |
| single-stranded-dna-specific exonuclease recj | BC353_07435 | Not Available | + | 447069 - 448808 | 64276.1 |
| transcriptional regulator pdhr | BC353_07440 | Not Available | + | 449400 - 450170 | 29386.2 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | BC353_07445 | Not Available | + | 450220 - 452880 | 98998.9 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | BC353_07450 | Not Available | + | 452899 - 454785 | 65335.6 |
| dihydrolipoyl dehydrogenase | BC353_07455 | Not Available | + | 455053 - 456480 | 51012.0 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | BC353_07465 | Not Available | + | 457238 - 458188 | 35129.0 |
| cell division protein ftsl | BC353_07470 | Not Available | + | 458198 - 458518 | 12174.1 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


