Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenylate cyclase | BC353_07320 | Not Available | + | 420089 - 421606 | 58642.9 |
| chemotaxis protein | BC353_07325 | Not Available | + | 422091 - 423347 | 46207.2 |
| bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase | BC353_07330 | Not Available | + | 423471 - 426317 | 109330.0 |
| bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase | BC353_07335 | Not Available | + | 426381 - 427811 | 50555.8 |
| outer membrane channel protein tolc | BC353_07340 | Not Available | - | 427929 - 429245 | 47825.8 |
| adp-ribose diphosphatase | BC353_07345 | Not Available | + | 429477 - 430103 | 23593.1 |
| dehydrogenase | BC353_07350 | Not Available | + | 430110 - 430556 | 17018.5 |
| 3',5'-cyclic-amp phosphodiesterase | BC353_07355 | Not Available | + | 430581 - 431399 | 30464.1 |
| esterase yqia | BC353_07360 | Not Available | + | 431401 - 431988 | 22257.6 |
| dna topoisomerase iv subunit b | BC353_07365 | Not Available | + | 432315 - 434195 | 69469.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


