Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pp_00345 | BC353_07165 | Not Available | - | 386145 - 387116 | Not Available |
| hypothetical protein | BC353_07170 | Not Available | + | 387269 - 387529 | 9854.86 |
| hypothetical protein | BC353_07175 | Not Available | + | 387579 - 387923 | 13313.2 |
| l-aspartate oxidase | BC353_07180 | Not Available | - | 387948 - 389555 | 59876.1 |
| rna polymerase sigma factor rpoe | BC353_07190 | Not Available | + | 390061 - 390633 | 21462.5 |
| anti-sigma e factor | BC353_07195 | Not Available | + | 390665 - 391285 | 22812.8 |
| sigma-e factor regulatory protein rseb | BC353_07200 | Not Available | + | 391282 - 392247 | 36167.4 |
| transcriptional regulator | BC353_07205 | Not Available | + | 392244 - 392714 | 16862.0 |
| elongation factor 4 | BC353_07210 | Not Available | + | 392827 - 394620 | 66033.7 |
| signal peptidase i | BC353_07215 | Not Available | + | 394712 - 395608 | 33914.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


