Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase | BC353_01605 | Not Available | - | 335506 - 336852 | 47858.7 |
| deoxyribose-phosphate aldolase | BC353_01610 | Not Available | - | 336940 - 337719 | 27960.7 |
| hypothetical protein | BC353_01615 | Not Available | + | 337827 - 338009 | 6344.77 |
| nucleoside transporter nupc | BC353_01620 | Not Available | - | 338321 - 339577 | 43572.2 |
| deoxyribonuclease | BC353_01625 | Not Available | - | 339764 - 340588 | 30291.7 |
| hypothetical protein | BC353_01630 | Not Available | - | 340730 - 341503 | 28847.5 |
| sodium:alanine symporter | BC353_01635 | Not Available | - | 341667 - 343076 | 50543.4 |
| duf3545 domain-containing protein | BC353_01640 | Not Available | + | 343789 - 343968 | 7203.81 |
| cation-binding protein | BC353_01645 | Not Available | - | 344112 - 344663 | 21907.0 |
| uracil-dna glycosylase | BC353_01650 | Not Available | - | 344753 - 345433 | 25419.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


