Vibrio cholerae str. VN-2825

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VN-2825 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain exhibits a facultative anaerobic metabolism, allowing it to thrive in both oxygen-rich and oxygen-poor environments. As a heterotroph, V. cholerae str. VN-2825 relies on organic compounds as its energy source, which is indicative of its adaptability to various habitats. The optimal growth temperature for this strain is approximately 20.0°C, suggesting a preference for cooler environments, which may be relevant in understanding its ecological niche. Vibrio cholerae is commonly found in aquatic environments, including brackish waters and estuaries, where it can associate with phytoplankton and other organic materials. This association may play a critical role in the bacterium's survival and proliferation, as it can utilize the organic matter provided by these environments. The ability to exist as a single cell rather than in clusters or chains may also enhance its dispersal capabilities in diverse aquatic habitats, facilitating its colonization and adaptation to varying ecological conditions. Overall, the traits of V. cholerae str. VN-2825 underscore its ecological versatility and highlight its potential interactions within aquatic ecosystems, which could be significant for understanding its role in nutrient cycling and microbial community dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VN-2825
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae str. VN-2825

Accession NumberMCBA00000000.1

Gene Summary

Adenine Count

1091937 bp

Thymine Count

1095327 bp

Guanine Count

975965 bp

Cytosine Count

1000002 bp

Genome Length

4163231 bp

Protein-coding Genes

3582 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
thymidine phosphorylaseBC353_01605Not Available-335506 - 33685247858.7
deoxyribose-phosphate aldolaseBC353_01610Not Available-336940 - 33771927960.7
hypothetical proteinBC353_01615Not Available+337827 - 3380096344.77
nucleoside transporter nupcBC353_01620Not Available-338321 - 33957743572.2
deoxyribonucleaseBC353_01625Not Available-339764 - 34058830291.7
hypothetical proteinBC353_01630Not Available-340730 - 34150328847.5
sodium:alanine symporterBC353_01635Not Available-341667 - 34307650543.4
duf3545 domain-containing proteinBC353_01640Not Available+343789 - 3439687203.81
cation-binding proteinBC353_01645Not Available-344112 - 34466321907.0
uracil-dna glycosylaseBC353_01650Not Available-344753 - 34543325419.3

Displaying genes 371 – 380 of 3713 in total

Pathways

62 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites