Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| benzoate transporter | BC353_06155 | Not Available | + | 3861059 - 3862219 | 41154.8 |
| o-succinylbenzoate--coa ligase | BC353_06160 | Not Available | - | 3862248 - 3863678 | 52037.5 |
| o-succinylbenzoate synthase | BC353_06165 | Not Available | - | 3863654 - 3864652 | 36546.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | BC353_06170 | Not Available | - | 3864741 - 3865607 | 31993.1 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | BC353_06175 | Not Available | - | 3865632 - 3866423 | 29003.6 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | BC353_06180 | Not Available | - | 3866413 - 3868125 | 62334.7 |
| isochorismate synthase | BC353_06185 | Not Available | - | 3868122 - 3869429 | 48697.4 |
| aminotransferase | BC353_06190 | Not Available | + | 3869644 - 3870858 | 45197.9 |
| 5'-deoxynucleotidase | BC353_06195 | Not Available | + | 3871011 - 3871595 | 22242.7 |
| dgtpase | BC353_06200 | Not Available | + | 3871652 - 3872977 | 49940.6 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


