Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | BC353_06055 | Not Available | + | 3839694 - 3840629 | 33578.9 |
| pyoverdine biosynthesis protein pvcb | BC353_06060 | Not Available | + | 3840938 - 3841786 | 33125.1 |
| hypothetical protein | BC353_06065 | Not Available | + | 3841771 - 3843234 | 54446.9 |
| lysr family transcriptional regulator | BC353_06070 | Not Available | - | 3843365 - 3844255 | 32978.9 |
| pvca protein | BC353_06075 | Not Available | + | 3844614 - 3846440 | 70523.5 |
| trimethylamine n-oxide reductase i catalytic subunit | BC353_06080 | Not Available | - | 3846530 - 3848977 | 89446.7 |
| cytochrome c | BC353_06085 | Not Available | - | 3849000 - 3850094 | 40277.6 |
| transporter | BC353_06090 | Not Available | - | 3850262 - 3851467 | 41886.3 |
| lysr family transcriptional regulator | BC353_06095 | Not Available | - | 3851809 - 3852756 | 35742.8 |
| lytic transglycosylase | BC353_06100 | Not Available | - | 3852921 - 3853892 | 36833.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


