Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | BC353_05880 | Not Available | - | 3715790 - 3716467 | 24514.6 |
| arylesterase | BC353_05885 | Not Available | + | 3716466 - 3717065 | 21913.6 |
| trans-2-enoyl-coa reductase | BC353_05890 | Not Available | + | 3717155 - 3718363 | 44841.4 |
| diguanylate cyclase | BC353_05895 | Not Available | + | 3718560 - 3720437 | 70686.1 |
| isopentenyl-diphosphate delta-isomerase | BC353_05900 | Not Available | + | 3720563 - 3722212 | 61032.3 |
| hypothetical protein | BC353_05905 | Not Available | - | 3722209 - 3722313 | 3815.82 |
| molecular chaperone dnaj | BC353_05910 | Not Available | - | 3722370 - 3722999 | 24863.8 |
| hypothetical protein | BC353_05915 | Not Available | + | 3723235 - 3723822 | 22112.0 |
| transcription initiation factor tfiiib | BC353_05920 | Not Available | + | 3724086 - 3724307 | 8374.08 |
| had family hydrolase | BC353_05925 | Not Available | - | 3724503 - 3725183 | 25100.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


