Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter atp-binding protein artp | BC353_05775 | Not Available | - | 3693373 - 3694116 | 27269.0 |
| Trna-cys | Not Available | Not Available | + | 3694397 - 3694470 | Not Available |
| protein viaa | BC353_05785 | Not Available | - | 3694694 - 3696139 | 55704.1 |
| aaa family atpase | BC353_05790 | Not Available | - | 3696148 - 3697806 | 63133.8 |
| adp-ribose pyrophosphatase | BC353_05795 | Not Available | + | 3698144 - 3698659 | 19030.0 |
| low-specificity l-threonine aldolase | BC353_05800 | Not Available | + | 3698668 - 3699675 | 36375.4 |
| cytochrome c554 | BC353_05805 | Not Available | + | 3699804 - 3700112 | 11128.4 |
| tetr family transcriptional regulator | BC353_05810 | Not Available | + | 3700216 - 3700950 | 28606.5 |
| dead/deah box helicase | BC353_05815 | Not Available | - | 3701050 - 3702318 | 46872.0 |
| acp phosphodiesterase | BC353_05820 | Not Available | - | 3702355 - 3702936 | 22042.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


