Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxc | BC353_05725 | Not Available | + | 3686453 - 3686887 | 15969.1 |
| mfs transporter | BC353_05730 | Not Available | + | 3687076 - 3688230 | 41129.9 |
| lipase | BC353_05735 | Not Available | + | 3688357 - 3689145 | 30981.7 |
| Trna-cys | Not Available | Not Available | + | 3689178 - 3689251 | Not Available |
| Trna-leu | Not Available | Not Available | + | 3689275 - 3689361 | Not Available |
| glyoxalase | BC353_05750 | Not Available | - | 3689579 - 3690079 | 19042.5 |
| lysr family transcriptional regulator | BC353_05755 | Not Available | + | 3690254 - 3691159 | 34109.1 |
| arginine transporter permease subunit artm | BC353_05760 | Not Available | - | 3691212 - 3691880 | 24770.8 |
| abc transporter | BC353_05765 | Not Available | - | 3691877 - 3692566 | 24566.8 |
| arginine abc transporter substrate-binding protein | BC353_05770 | Not Available | - | 3692568 - 3693299 | 26641.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


