Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | BC353_05625 | Not Available | + | 3663969 - 3665684 | 63244.3 |
| abc transporter atp-binding protein | BC353_05630 | Not Available | - | 3665827 - 3667515 | 62356.5 |
| abc transporter permease | BC353_05635 | Not Available | - | 3667508 - 3669160 | 62288.2 |
| pilus assembly protein pilz | BC353_05640 | Not Available | + | 3669430 - 3670095 | 24627.3 |
| atpase | BC353_05645 | Not Available | - | 3670087 - 3672660 | 97101.6 |
| abc transporter substrate-binding protein | BC353_05650 | Not Available | - | 3672678 - 3673772 | 41274.2 |
| conjugal transfer protein traf | BC353_05655 | Not Available | - | 3673984 - 3675144 | 41854.0 |
| hypothetical protein | BC353_05660 | Not Available | - | 3675246 - 3675551 | 11190.7 |
| hypothetical protein | BC353_05665 | Not Available | - | 3675568 - 3676218 | 24235.7 |
| hypothetical protein | BC353_05670 | Not Available | - | 3676260 - 3676457 | 7627.48 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


