Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chex | BC353_17225 | Not Available | + | 3550833 - 3551294 | 16750.6 |
| mbl fold metallo-hydrolase | BC353_17230 | Not Available | - | 3551484 - 3552578 | 41955.7 |
| glucose-6-phosphate isomerase | BC353_17235 | Not Available | - | 3552780 - 3554432 | 60753.0 |
| glycine dehydrogenase (aminomethyl-transferring) | BC353_17245 | Not Available | - | 3555625 - 3558489 | 103982.0 |
| glycine cleavage system protein h | BC353_17250 | Not Available | - | 3558633 - 3559013 | 13932.0 |
| serine hydroxymethyltransferase | BC353_17255 | Not Available | - | 3559050 - 3560357 | 46919.4 |
| transcriptional regulator | BC353_17260 | Not Available | + | 3560871 - 3561494 | 23798.4 |
| glycine cleavage system protein t | BC353_17265 | Not Available | + | 3561738 - 3562868 | 40599.2 |
| threonine--trna ligase | BC353_17270 | Not Available | + | 3563161 - 3565089 | 73475.9 |
| translation initiation factor if-3 | BC353_17275 | Not Available | + | 3565255 - 3565644 | 15039.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


