Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polymerase | BC353_05525 | Not Available | + | 3500368 - 3501684 | 49206.2 |
| hypothetical protein | BC353_16965 | Not Available | + | 3502602 - 3502919 | 11108.0 |
| hypothetical protein | BC353_16970 | Not Available | + | 3502922 - 3504157 | 47260.1 |
| translation initiation factor sui1 | BC353_16975 | Not Available | - | 3504623 - 3504934 | 11082.6 |
| phage tail protein | BC353_16980 | Not Available | - | 3504942 - 3505340 | 15072.9 |
| d-alanine--d-alanine ligase a | BC353_16985 | Not Available | - | 3505511 - 3506515 | 37306.4 |
| cytochrome c biogenesis protein ccda | BC353_16990 | Not Available | - | 3506666 - 3507241 | 20830.9 |
| protein acetyltransferase | BC353_16995 | Not Available | + | 3507460 - 3510141 | 98172.6 |
| lysr family transcriptional regulator | BC353_17000 | Not Available | - | 3510191 - 3511078 | 32866.9 |
| ligand-gated channel | BC353_17005 | Not Available | + | 3511311 - 3513443 | 78440.0 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


