Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | BC353_05425 | Not Available | + | 3481411 - 3481728 | 11670.1 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | BC353_05430 | Not Available | + | 3481731 - 3482201 | 17535.3 |
| penicillin-binding protein 2 | BC353_05435 | Not Available | + | 3482208 - 3484124 | 72046.4 |
| rod shape-determining protein roda | BC353_05440 | Not Available | + | 3484121 - 3485242 | 40709.5 |
| hypothetical protein | BC353_05445 | Not Available | + | 3485242 - 3486033 | 29291.7 |
| d-alanyl-d-alanine carboxypeptidase | BC353_05450 | Not Available | + | 3486125 - 3487300 | 42877.2 |
| hypothetical protein | BC353_05455 | Not Available | - | 3487259 - 3487426 | 6647.03 |
| hypothetical protein | BC353_05460 | Not Available | + | 3487448 - 3487726 | 10406.7 |
| octanoyltransferase | BC353_05465 | Not Available | + | 3487914 - 3488564 | 24689.7 |
| lipoyl synthase | BC353_05470 | Not Available | + | 3488557 - 3489522 | 36486.3 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


