Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | BC353_05375 | Not Available | - | 3469309 - 3470472 | 43058.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | BC353_05380 | Not Available | + | 3470726 - 3472150 | 53563.2 |
| nucleoside triphosphate hydrolase | BC353_05385 | Not Available | + | 3472218 - 3473321 | 41569.8 |
| rrna maturation rnase ybey | BC353_05390 | Not Available | + | 3473318 - 3473782 | 17541.7 |
| magnesium/cobalt efflux protein | BC353_05395 | Not Available | + | 3473852 - 3474727 | 32917.9 |
| apolipoprotein n-acyltransferase | BC353_05400 | Not Available | + | 3474768 - 3476285 | 57108.6 |
| hypothetical protein | BC353_05405 | Not Available | - | 3476341 - 3476811 | 17415.6 |
| leucine--trna ligase | BC353_05410 | Not Available | + | 3476941 - 3479517 | 96626.0 |
| luciferase | BC353_05415 | Not Available | + | 3479694 - 3480308 | 23163.5 |
| dna polymerase iii subunit delta | BC353_05420 | Not Available | + | 3480314 - 3481342 | 39019.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


