Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | BC353_01250 | Not Available | - | 252647 - 253117 | 16433.8 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BC353_01255 | Not Available | - | 253380 - 254489 | 40428.6 |
| riboflavin synthase subunit alpha | BC353_01260 | Not Available | - | 254530 - 255183 | 23551.4 |
| riboflavin biosynthesis protein ribd | BC353_01265 | Not Available | - | 255188 - 256291 | 40083.4 |
| transcriptional regulator nrdr | BC353_01270 | Not Available | - | 256317 - 256766 | 17032.6 |
| glutamate-5-semialdehyde dehydrogenase | BC353_01275 | Not Available | - | 256867 - 258117 | 44580.7 |
| glutamate 5-kinase | BC353_01280 | Not Available | - | 258129 - 259262 | 40182.5 |
| sigma factor-binding protein crl | BC353_01285 | Not Available | - | 259384 - 259773 | 14963.7 |
| hypothetical protein | BC353_01290 | Not Available | - | 259907 - 261154 | 46739.8 |
| xanthine phosphoribosyltransferase | BC353_01295 | Not Available | - | 261251 - 261715 | 17667.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


