Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease t | BC353_05175 | Not Available | + | 3420396 - 3421070 | 24813.2 |
| sodium:proton antiporter | BC353_05180 | Not Available | + | 3421171 - 3422496 | 45999.8 |
| amidophosphoribosyltransferase | BC353_05185 | Not Available | - | 3422626 - 3424140 | 55914.6 |
| bacteriocin production protein | BC353_05190 | Not Available | - | 3424173 - 3424664 | 17770.9 |
| cell division protein dedd | BC353_05195 | Not Available | - | 3424727 - 3425323 | 21519.9 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | BC353_05200 | Not Available | - | 3425324 - 3426589 | 45431.3 |
| acetyl-coa carboxylase subunit beta | BC353_05205 | Not Available | - | 3426634 - 3427560 | 33779.1 |
| trna pseudouridine(38,39,40) synthase trua | BC353_05210 | Not Available | - | 3427734 - 3428528 | 29847.7 |
| hypothetical protein | BC353_05215 | Not Available | - | 3428650 - 3433446 | 175216.0 |
| glutamine--trna ligase | BC353_05220 | Not Available | - | 3433674 - 3435344 | 64092.9 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


