Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multifunctional fatty acid oxidation complex subunit alpha | BC353_04970 | Not Available | - | 3380003 - 3382129 | 77233.6 |
| 3-ketoacyl-coa thiolase | BC353_04975 | Not Available | - | 3382129 - 3383436 | 46356.3 |
| rna polymerase subunit sigma | BC353_04980 | Not Available | + | 3383967 - 3384530 | 22485.6 |
| chemotaxis protein | BC353_04985 | Not Available | + | 3384523 - 3385254 | 27228.8 |
| long-chain fatty acid transporter | BC353_04990 | Not Available | + | 3385514 - 3386758 | 45541.2 |
| aromatic hydrocarbon degradation protein | BC353_04995 | Not Available | + | 3387061 - 3388332 | 45770.2 |
| protein-tyrosine-phosphatase | BC353_05000 | Not Available | - | 3388385 - 3388852 | 17351.7 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | BC353_05005 | Not Available | + | 3388938 - 3389543 | 22397.7 |
| cell envelope biogenesis protein asma | BC353_05010 | Not Available | - | 3389623 - 3391728 | 75130.9 |
| uridine kinase | BC353_05015 | Not Available | - | 3391826 - 3392467 | 24242.4 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


