Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel/dipeptide/oligopeptide abc transporter substrate-binding protein | BC353_16325 | Not Available | + | 3226982 - 3228538 | 57700.7 |
| abc transporter permease | BC353_16330 | Not Available | + | 3228693 - 3229670 | 35878.8 |
| abc transporter permease | BC353_16335 | Not Available | + | 3229673 - 3230611 | 34252.4 |
| sporulation protein | BC353_16340 | Not Available | + | 3230786 - 3231733 | 34345.8 |
| hypothetical protein | BC353_16345 | Not Available | + | 3232037 - 3232287 | 9350.06 |
| lysr family transcriptional regulator | BC353_16350 | Not Available | + | 3232509 - 3233378 | 33003.2 |
| nrdh-redoxin | BC353_16355 | Not Available | - | 3233409 - 3233642 | 9029.13 |
| metal-dependent hydrolase | BC353_16360 | Not Available | + | 3233816 - 3234322 | 19657.2 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase | BC353_16365 | Not Available | + | 3234319 - 3235407 | 40496.0 |
| hypothetical protein | BC353_16370 | Not Available | + | 3235606 - 3235830 | 8943.32 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


