Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BC353_04860 | Not Available | + | 3183882 - 3184202 | 12144.2 |
| histidine utilization repressor | BC353_04865 | Not Available | + | 3184376 - 3185086 | 26769.2 |
| imidazolonepropionase | BC353_04870 | Not Available | + | 3185190 - 3186398 | 43701.4 |
| formimidoylglutamase | BC353_04875 | Not Available | + | 3186388 - 3187410 | 37604.4 |
| urocanate hydratase | BC353_04880 | Not Available | + | 3187429 - 3189126 | 61800.0 |
| histidine ammonia-lyase | BC353_04885 | Not Available | + | 3189138 - 3190673 | 54836.3 |
| hypothetical protein | BC353_04890 | Not Available | + | 3190822 - 3191547 | 27490.8 |
| lysine--trna ligase | BC353_16155 | Not Available | - | 3193451 - 3194983 | 58053.4 |
| peptide chain release factor 2 | BC353_16160 | Not Available | - | 3195014 - 3195913 | 33534.9 |
| branched-chain amino acid transport system ii carrier protein | BC353_16165 | Not Available | - | 3196282 - 3197595 | 46191.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


