Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BC353_04755 | Not Available | + | 3164457 - 3165332 | 31700.7 |
| phosphoribosylglycinamide formyltransferase 2 | BC353_04760 | Not Available | + | 3165486 - 3166661 | 42332.5 |
| thiopurine s-methyltransferase | BC353_04770 | Not Available | - | 3166762 - 3167418 | 25125.0 |
| phosphoribosylglycinamide formyltransferase | BC353_04775 | Not Available | + | 3167887 - 3168666 | 29116.6 |
| hypothetical protein | BC353_04780 | Not Available | + | 3168575 - 3168811 | 8960.99 |
| integration host factor subunit alpha | BC353_04785 | Not Available | - | 3168795 - 3169091 | 11120.4 |
| phenylalanine--trna ligase subunit beta | BC353_04790 | Not Available | - | 3169531 - 3171918 | 86126.6 |
| phenylalanine--trna ligase subunit alpha | BC353_04795 | Not Available | - | 3171945 - 3172928 | 37022.1 |
| acetyltransferase | BC353_04800 | Not Available | + | 3173219 - 3173704 | 17576.2 |
| Trna-gly | Not Available | Not Available | + | 3173766 - 3173841 | Not Available |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


