Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-ribazole phosphatase | BC353_04705 | Not Available | - | 3154981 - 3155583 | 22355.0 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | BC353_04710 | Not Available | - | 3155590 - 3156129 | 19676.8 |
| adenosylcobinamide-gdp ribazoletransferase | BC353_04715 | Not Available | - | 3156138 - 3156923 | 28609.6 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | BC353_04720 | Not Available | - | 3156923 - 3157948 | 36086.7 |
| peptide-methionine (r)-s-oxide reductase | BC353_04725 | Not Available | - | 3158433 - 3158879 | 16817.7 |
| l-cystine transporter tcyp | BC353_04730 | Not Available | + | 3159225 - 3160598 | 47326.4 |
| exodeoxyribonuclease i | BC353_04735 | Not Available | + | 3160746 - 3162170 | 54662.0 |
| hypothetical protein | BC353_04740 | Not Available | + | 3162202 - 3162576 | 13272.5 |
| cidb/lrgb family autolysis modulator | BC353_04745 | Not Available | + | 3162567 - 3163241 | 23960.2 |
| cytidine deaminase | BC353_04750 | Not Available | + | 3163411 - 3164298 | 31957.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


