Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 modification protein | BC353_04655 | Not Available | - | 3144806 - 3145060 | 9367.02 |
| competence/damage-inducible protein a | BC353_04660 | Not Available | - | 3145309 - 3146547 | 45394.4 |
| ubiquitin--protein ligase | BC353_04665 | Not Available | + | 3146720 - 3147619 | 33453.1 |
| transcriptional regulator | BC353_04670 | Not Available | + | 3147885 - 3148397 | 18317.8 |
| chemotaxis protein | BC353_04675 | Not Available | + | 3148628 - 3150238 | 57665.7 |
| hypothetical protein | BC353_04680 | Not Available | + | 3150331 - 3150681 | 13351.4 |
| sam-dependent methyltransferase | BC353_04685 | Not Available | + | 3150860 - 3151435 | 21620.7 |
| vitamin b12 abc transporter atp-binding protein btud | BC353_04690 | Not Available | - | 3151819 - 3152574 | 27529.2 |
| vitamin b12 abc transporter permease btuc | BC353_04695 | Not Available | - | 3152561 - 3153556 | 35431.9 |
| succinylglutamate desuccinylase | BC353_04700 | Not Available | - | 3153637 - 3154665 | 39108.8 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


