Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VN-2825
Accession NumberMCBA00000000.1
Gene Summary
Adenine Count
1091937 bp
Thymine Count
1095327 bp
Guanine Count
975965 bp
Cytosine Count
1000002 bp
Genome Length
4163231 bp
Protein-coding Genes
3582 genes
Non-Coding Genes
131 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BC353_10815 | Not Available | - | 1299052 - 1299411 | 13204.1 |
| sulfate transporter | BC353_10820 | Not Available | - | 1299422 - 1299691 | 9746.87 |
| trna cytosine(34) acetyltransferase tmca | BC353_10830 | Not Available | - | 1301305 - 1303323 | 75518.3 |
| spermidine/putrescine abc transporter substrate-binding protein potd | BC353_10835 | Not Available | + | 1303544 - 1304575 | 38759.3 |
| chromosome partitioning protein parb | BC353_10840 | Not Available | - | 1304635 - 1305606 | 35925.3 |
| chromosome partitioning protein para | BC353_10845 | Not Available | - | 1305614 - 1306831 | 46188.4 |
| antitoxin | BC353_10855 | Not Available | + | 1308415 - 1308657 | 8690.41 |
| plasmid stabilization protein | BC353_10860 | Not Available | + | 1308650 - 1308949 | 11909.2 |
| hypothetical protein | BC353_10865 | Not Available | + | 1309011 - 1310426 | 50421.4 |
| hypothetical protein | BC353_10870 | Not Available | + | 1310426 - 1310881 | 16824.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


