Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VcCHNf5
Accession NumberQXWE00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | D2926_10645 | Not Available | - | 2345153 - 2346433 | 47409.6 |
| inner membrane protein ypjd | D2926_10650 | Not Available | - | 2346516 - 2347310 | 29222.8 |
| signal recognition particle protein | D2926_10655 | Not Available | + | 2347523 - 2348908 | 50361.9 |
| 30s ribosomal protein s16 | D2926_10660 | Not Available | + | 2349144 - 2349392 | 9082.88 |
| ribosome maturation factor rimm | D2926_10665 | Not Available | + | 2349420 - 2349974 | 21307.3 |
| trna (guanosine(37)-n1)-methyltransferase trmd | D2926_10670 | Not Available | + | 2350002 - 2350745 | 27808.2 |
| 50s ribosomal protein l19 | D2926_10675 | Not Available | + | 2350787 - 2351140 | 13245.2 |
| outer membrane-stress sensor serine endopeptidase degs | D2926_10680 | Not Available | - | 2351260 - 2352318 | 37557.4 |
| degq family serine endoprotease | D2926_10685 | Not Available | - | 2352495 - 2353865 | 48342.2 |
| duf1043 family protein | D2926_10690 | Not Available | - | 2353994 - 2354431 | 16241.5 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


