Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Vibrio cholerae str. VcCHNf4
Accession NumberQXWD00000000.1
Gene Summary
Adenine Count
1043487 bp
Thymine Count
1040744 bp
Guanine Count
926748 bp
Cytosine Count
950409 bp
Genome Length
3961443 bp
Protein-coding Genes
3564 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hemolysin iii family protein | D2925_16145 | Not Available | + | 3509104 - 3509751 | 23695.0 |
| duf3157 family protein | D2925_16150 | Not Available | - | 3509790 - 3510446 | 24286.1 |
| trkh family potassium uptake protein | D2925_16155 | Not Available | - | 3510359 - 3511804 | 52396.0 |
| trk system potassium transporter trka | D2925_16160 | Not Available | - | 3511816 - 3513192 | 50115.1 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | D2925_16165 | Not Available | - | 3513254 - 3514534 | 47531.0 |
| methionyl-trna formyltransferase | D2925_16170 | Not Available | - | 3514590 - 3515537 | 34100.9 |
| peptide deformylase | D2925_16175 | Not Available | - | 3515555 - 3516064 | 19148.2 |
| lysm peptidoglycan-binding domain-containing protein | D2925_16180 | Not Available | + | 3516156 - 3517331 | 43327.8 |
| dna-protecting protein dpra | D2925_16185 | Not Available | + | 3517331 - 3518446 | 39935.2 |
| duf494 domain-containing protein | D2925_16190 | Not Available | + | 3518449 - 3518925 | 18469.2 |
Pathways
62 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Flagella and chemotaxis operon (flaA/che operon activation)
Flagella and chemotaxis operon (flaA/che operon activation)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
Fatty Acid Oxidation (Decanoate)
Fatty Acid Oxidation (Decanoate)
Toluene degradation
Toluene degradation
Benzoate degradation I
Benzoate degradation I
Benzoate degradation II
Benzoate degradation II
Ethylbenzene degradation
Ethylbenzene degradation


