Vibrio cholerae str. VcCHNf4

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf4 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions, and it relies on organic compounds as a heterotrophic energy source. The optimal growth temperature for VcCHNf4 is approximately 20.0 °C, which suggests a preference for cooler environments, potentially influencing its ecological niche. Vibrio cholerae strains, including VcCHNf4, inhabit a variety of habitats, indicating their adaptability to diverse ecological settings. This adaptability may allow the strain to occupy various niches, such as aquatic environments where it can associate with phytoplankton or other organic matter. The ability to grow under varying oxygen levels may also facilitate its survival in fluctuating conditions, highlighting the ecological versatility of this bacterium. Given these traits, Vibrio cholerae strain VcCHNf4 may play a role in nutrient cycling in its habitat, contributing to the breakdown of organic material and influencing microbial community dynamics. Further studies could elucidate its specific interactions within its ecological context, providing insights into its functional roles in the environments it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf4
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae str. VcCHNf4

Accession NumberQXWD00000000.1

Gene Summary

Adenine Count

1043487 bp

Thymine Count

1040744 bp

Guanine Count

926748 bp

Cytosine Count

950409 bp

Genome Length

3961443 bp

Protein-coding Genes

3564 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
3'-5' exonucleaseD2925_13985Not Available+3069410 - 307003924071.2
acetate--coa ligaseD2925_13990Not Available+3070242 - 307219171921.6
type ii 3-dehydroquinate dehydrataseD2925_13995Not Available+3072571 - 307302316562.9
acetyl-coa carboxylase biotin carboxyl carrier proteinD2925_14000Not Available+3073080 - 307354116020.3
acetyl-coa carboxylase biotin carboxylase subunitD2925_14005Not Available+3073556 - 307489949460.9
50s ribosomal protein l11 methyltransferaseD2925_14010Not Available+3075108 - 307599532242.6
trna dihydrouridine synthase dusbD2925_14015Not Available+3076108 - 307710336515.9
fis family transcriptional regulatorD2925_14020Not Available+3077127 - 307742311112.5
laci family dna-binding transcriptional regulatorD2925_14025Not Available+3077561 - 307855936041.3
cytotoxic necrotizing factorD2925_14030Not Available+3078996 - 308153694501.3

Displaying genes 2741 – 2750 of 3659 in total

Pathways

62 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites