Vibrio cholerae str. VcCHNf4

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf4 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic conditions, and it relies on organic compounds as a heterotrophic energy source. The optimal growth temperature for VcCHNf4 is approximately 20.0 °C, which suggests a preference for cooler environments, potentially influencing its ecological niche. Vibrio cholerae strains, including VcCHNf4, inhabit a variety of habitats, indicating their adaptability to diverse ecological settings. This adaptability may allow the strain to occupy various niches, such as aquatic environments where it can associate with phytoplankton or other organic matter. The ability to grow under varying oxygen levels may also facilitate its survival in fluctuating conditions, highlighting the ecological versatility of this bacterium. Given these traits, Vibrio cholerae strain VcCHNf4 may play a role in nutrient cycling in its habitat, contributing to the breakdown of organic material and influencing microbial community dynamics. Further studies could elucidate its specific interactions within its ecological context, providing insights into its functional roles in the environments it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf4
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Vibrio cholerae str. VcCHNf4

Accession NumberQXWD00000000.1

Gene Summary

Adenine Count

1043487 bp

Thymine Count

1040744 bp

Guanine Count

926748 bp

Cytosine Count

950409 bp

Genome Length

3961443 bp

Protein-coding Genes

3564 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cell division protein ftswD2925_06340Not Available+1419983 - 142117943960.9
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseD2925_06345Not Available+1421166 - 142222737921.3
udp-n-acetylmuramate--l-alanine ligaseD2925_06350Not Available+1422241 - 142370153019.5
ftsq-type potra domain-containing proteinD2925_06355Not Available+1423883 - 142466529758.8
cell division protein ftsaD2925_06360Not Available+1424658 - 142592045574.5
cell division protein ftszD2925_06365Not Available+1425951 - 142714741531.0
udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylaseD2925_06370Not Available+1427245 - 142816233969.6
duf721 domain-containing proteinD2925_06375Not Available-1428268 - 142874117529.3
protein translocase subunit secaD2925_06380Not Available+1429094 - 1431805102476.0
8-oxo-dgtp diphosphatase muttD2925_06385Not Available+1431955 - 143235315043.7

Displaying genes 1251 – 1260 of 3659 in total

Pathways

62 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites