Yersinia pseudotuberculosis

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia pseudotuberculosis is a gram-negative, rod-shaped bacterium that thrives in a mesophilic temperature range, classifying it as a mesophile. This microbe is a chemoheterotroph, deriving energy and carbon from organic compounds, and is characterized as a facultative anaerobe, allowing it to survive in both aerobic and anaerobic environments. Y. pseudotuberculosis can be found in various body sites across different species, including the gastrointestinal tract of mammals, where it can inhabit both wild and domesticated animals, and occasionally infect humans. As a gram-negative organism, Y. pseudotuberculosis possesses a thin peptidoglycan layer surrounded by an outer membrane rich in lipopolysaccharides. This structure not only provides structural integrity but also plays a crucial role in the bacterium's pathogenicity, helping it evade the host immune response. The mesophilic nature of Y. pseudotuberculosis enables it to grow optimally at temperatures around 28-32°C, which is conducive for survival in the warm-blooded hosts it often infects. Y. pseudotuberculosis is known for causing a disease similar to tuberculosis in animals, particularly in the lymphatic system, when it infects the host. In humans, it can lead to a gastrointestinal infection that may result in symptoms ranging from mild diarrhea to severe abdominal pain, often mimicking appendicitis. This bacterium can be transmitted through contaminated food or water, highlighting its role as a public health concern. Strikingly, Yersinia pseudotuberculosis has an intriguing evolutionary history, being closely related to Yersinia pestis, the causative agent of plague. This relationship has led to ongoing studies on the genetic and virulence factors that enable Y. pseudotuberculosis to thrive in diverse environments, opening doors for potential therapeutic developments against its pathogenic relatives.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia pseudotuberculosis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia pseudotuberculosis
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia pseudotuberculosis

Accession NumberNZ_CP033713.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phospholipase d-like domain-containing proteinEGX52_RS00050Not Available+7921 - 81548779.59
t3ss effector protein-tyrosine-phosphatase yophEGX52_RS00055Not Available+8437 - 984350872.4
phospholipase d-like domain-containing proteinEGX52_RS00060Not Available-10064 - 1033610615.8
phospholipase d-like domain-containing proteinEGX52_RS00065Not Available-10355 - 1137238058.6
type iii secretion system exported negative regulator lcrq/yscm1EGX52_RS00075Not Available-11920 - 1226712412.8
sctl family type iii secretion system stator protein ysclEGX52_RS00080Not Available-12492 - 1315724646.5
sctk family type iii secretion system sorting platform protein ysckEGX52_RS00085Not Available-13103 - 1373223992.4
sctj family type iii secretion inner membrane ring lipoprotein yscjEGX52_RS00090Not Available-13732 - 1446627043.9
scti family type iii secretion system inner rod subunit lcroEGX52_RS00095Not Available-14473 - 1482012670.2
t3ss polymerization control protein yoprEGX52_RS00100Not Available-14821 - 1531818349.0

Displaying genes 41 – 50 of 4520 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites