Yersinia intermedia

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia intermedia is a Gram-negative, rod-shaped bacterium that inhabits diverse environments, including freshwater ecosystems, marine environments, and even extreme habitats such as permafrost and Mars analog environments. This organism has been identified in various ecological niches, including lakes like Gr navatn, as well as in food sources, suggesting a versatile survival strategy that enables it to thrive in both aquatic and terrestrial settings. Yersinia intermedia's adaptability to a range of habitats highlights its potential resilience to environmental changes, which may be particularly relevant in the context of climate change and habitat alteration. The presence of this bacterium in extreme environments, such as permafrost, invites further investigation into its metabolic capabilities and potential roles in nutrient cycling within these ecosystems. Understanding Yersinia intermedia's ecological interactions could provide insights into microbial life in extreme conditions and its implications for ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia intermedia
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatenvironment; food; Fresh water; lake Gr navatn; Marine; Mars analog environments; permafrost
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia intermedia

Accession NumberNHOI00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4406 genes

Non-Coding Genes

230 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
d-cysteine desulfhydraseERS008476_00380A1JSN4+409459 - 41045134927.3
cystine transporter subunitERS008476_00381P0AEN0+410570 - 41137029120.9
putative amino-acid abc transporter permeaseERS008476_00382P0AFT3+411370 - 41203224325.1
putative amino-acid abc transporter atp-binding protein yeccERS008476_00383P37774+412035 - 41279027970.9
putative transcriptional regulatorERS008476_00384Not Available-412878 - 41324913602.0
uncharacterised proteinERS008476_00385Not Available-413249 - 41354211459.4
trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenaseERS008476_00386O52485-414032 - 418018144688.0
proline permeaseERS008476_00387P10502+418542 - 42002653320.3
ferrous iron transport permease efeuERS008476_00388Q1C8M3+420326 - 42117430723.1
ferrous iron transport periplasmic protein efeo%2ccontains peptidase-m75 domain and (frequently) cupredoxin-like domainERS008476_00389Q1C8M2+421191 - 42232141322.4

Displaying genes 421 – 430 of 26158 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites