Shigella boydii

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella boydii is a Gram-negative, rod-shaped bacterium that thrives in temperatures ranging from 25°C to 37°C, categorizing it as mesophilic. As a chemoheterotroph, it obtains its energy by breaking down organic compounds, specifically fermenting sugars, in the absence of light. This process yields lactic acid, ethanol, and carbon dioxide as byproducts. S. boydii is an anaerobic microbe, unable to tolerate oxygen and grows optimally in environments devoid of oxygen. The microbe's cell wall exhibits a characteristic Gram-negative staining pattern, comprising an outer membrane and a peptidoglycan layer. In terms of shape, S. boydii is a non-sporulating, non-motile rod, typically measuring 0.5-0.9 μm in width and 1.5-3.5 μm in length. It is found in various body sites, including the gastrointestinal tract, urinary tract, and genitourinary system, in humans as well as certain animal species. S. boydii is an obligate anaerobe, requiring a strictly anaerobic environment to grow and reproduce. It is capable of producing a variety of enzymes, including lactate dehydrogenase, pyruvate kinase, and phosphofructokinase, which facilitate its metabolic processes. Shigella boydii is a significant human pathogen, causing shigellosis, a diarrheal disease characterized by watery stools, fever, and abdominal cramps. The bacterium is highly infectious, with a single dose of as few as 10-100 bacteria sufficient to cause infection. It is often transmitted through contaminated food, water, or direct contact with an infected individual. Despite its pathogenic nature, S. boydii has contributed significantly to our understanding of bacterial metabolism and physiology. Its unique ability to thrive in anaerobic environments has made it a valuable model organism for studying anaerobic metabolism and the development of new antibiotics targeting anaerobic pathogens.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella boydii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella boydii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Gene Summary

Adenine Count

1225489 bp

Thymine Count

1222375 bp

Guanine Count

1264693 bp

Cytosine Count

1292857 bp

Genome Length

5005414 bp

Protein-coding Genes

4707 genes

Non-Coding Genes

659 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
protein of uncharacterised function (duf2556)NCTC8576_01922Not Available+1767059 - 17672387233.96
dna-binding transcriptional regulator envrNCTC8576_01923Not Available-1767241 - 176790325198.7
acriflavine resistance protein eNCTC8576_01924Not Available+1768302 - 176945941336.0
integral transmembrane proteinNCTC8576_01925Not Available+1769471 - 177118061456.5
5s ribosomal rnaNot AvailableNot Available+1769598 - 1769712Not Available
5s ribosomal rnaNot AvailableNot Available+1769843 - 1769957Not Available
23s ribosomal rnaNot AvailableNot Available+1770055 - 1772955Not Available
integral transmembrane proteinNCTC8576_01926Not Available+1771183 - 17713205025.89
integral transmembrane proteinNCTC8576_01927Not Available+1771336 - 177256844121.9
uncharacterised proteinNCTC8576_01928Not Available-1772425 - 177271511209.1

Displaying genes 2371 – 2380 of 20834 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites