Escherichia coli str. SP-16 Combo

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain SP-16 Combo is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as individual cells. This strain is adapted to a host-associated habitat, indicating a potential association with specific biological environments, such as the gastrointestinal tract of animals or humans. E. coli SP-16 Combo demonstrates facultative anaerobic metabolism, allowing it to thrive in both oxygen-rich and low-oxygen conditions, which is a common characteristic of many E. coli strains. The optimal growth temperature for E. coli SP-16 Combo is 37.0 °C, which is consistent with the physiological temperature of warm-blooded hosts, further emphasizing its adaptation to a host-associated lifestyle. This temperature preference suggests that E. coli SP-16 Combo may play a role in the microbial community dynamics within its host environment, potentially influencing nutrient cycling and microbial interactions. Understanding the traits of E. coli SP-16 Combo can offer insights into its ecological roles, particularly in relation to its interactions with the host's immune system and other microbial species. Its facultative anaerobic nature may provide it with a competitive advantage in fluctuating oxygen conditions within the host, contributing to its persistence and adaptability in complex microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. SP-16 Combo
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. SP-16 Combo

Accession NumberPOSU00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

7256 genes

Non-Coding Genes

466 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hydrophobe/amphiphile efflux-1 family rnd transporterC1I57_39535Not Available-6045858 - 604616811107.1
hydrophobe/amphiphile efflux-1 family rnd transporterC1I57_39540Not Available-6046169 - 604647911107.1
autotransporter outer membrane beta-barrel domain-containing proteinC1I57_39545Not Available-6046510 - 60466655432.17
atpaseC1I57_39550Not Available-6046646 - 60467744449.24
penicillin-binding protein 1bC1I57_39555Not Available+6046791 - 604710112200.7
phosphate transporter permease subunit pstcC1I57_39560Not Available-6047102 - 604741210926.8
autotransporter outer membrane beta-barrel domain-containing proteinC1I57_39565Not Available+6047413 - 60476387875.34
atp-dependent rna helicase hrpaC1I57_39570Not Available-6047724 - 604803411677.2
tmao reductase two-component system sensor histidine kinase torsC1I57_39575Not Available+6048035 - 604834511366.3
had family hydrolaseC1I57_39580Not Available-6048346 - 60484263122.66

Displaying genes 7611 – 7620 of 7722 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites