Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. SP-16 Combo
Accession NumberPOSU00000000.1
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrophobe/amphiphile efflux-1 family rnd transporter | C1I57_02945 | Not Available | - | 536208 - 538412 | 80035.0 |
| pyruvate formate lyase-activating protein | C1I57_03160 | Not Available | + | 570275 - 570410 | 4721.53 |
| arac family transcriptional regulator | C1I57_03165 | Not Available | + | 570411 - 571102 | 25607.0 |
| deda family general envelope maintenance protein yghb | C1I57_03170 | Not Available | - | 571142 - 571801 | 24135.3 |
| cystathionine beta-lyase | C1I57_03175 | Not Available | - | 571941 - 573128 | 43226.8 |
| hypothetical protein | C1I57_03180 | Not Available | + | 573232 - 573387 | 5991.37 |
| biopolymer transporter exbb | C1I57_03185 | Not Available | + | 573380 - 574114 | 26289.0 |
| biopolymer transporter exbd | C1I57_03190 | Not Available | + | 574121 - 574546 | 15527.9 |
| sdr family nad(p)-dependent oxidoreductase | C1I57_03195 | Not Available | - | 574585 - 575469 | 31488.8 |
| tigr00645 family protein | C1I57_03200 | Not Available | + | 575660 - 576154 | 18642.3 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism