Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. SP-16 Combo
Accession NumberPOSU00000000.1
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysialic acid transporter | C1I57_38570 | Not Available | - | 5987311 - 5987639 | 12136.7 |
| aromatic amino acid transporter arop | C1I57_38575 | Not Available | + | 5987640 - 5987788 | 5596.37 |
| glucose dehydrogenase | C1I57_38580 | Not Available | + | 5987969 - 5988066 | 3259.86 |
| hypothetical protein | C1I57_38585 | Not Available | + | 5988298 - 5988626 | 12500.9 |
| hypothetical protein | C1I57_38590 | Not Available | + | 5988627 - 5988955 | 12509.9 |
| zinc resistance-associated protein zrap | C1I57_38595 | Not Available | - | 5988985 - 5989284 | 10838.9 |
| type vi secretion system protein tssa | C1I57_38600 | Not Available | + | 5989285 - 5989613 | 12809.3 |
| type vi secretion system protein tssa | C1I57_38605 | Not Available | + | 5989614 - 5989942 | 12809.3 |
| ribonuclease e | C1I57_38610 | Not Available | - | 5989943 - 5990271 | 13234.1 |
| two-component system response regulator glrr | C1I57_38615 | Not Available | + | 5990311 - 5990600 | 10320.7 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism