Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. SP-16 Combo
Accession NumberPOSU00000000.1
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetate coa-transferase ydif | C1I57_01685 | Not Available | - | 317540 - 319135 | 57537.6 |
| 3-dehydroquinase | C1I57_01690 | Not Available | - | 319281 - 320039 | 27486.2 |
| quinate/shikimate dehydrogenase | C1I57_01695 | Not Available | - | 320070 - 320936 | 31229.6 |
| mfs transporter | C1I57_01700 | Not Available | - | 320948 - 322213 | 46078.0 |
| mfs transporter | C1I57_01705 | Not Available | - | 322440 - 323654 | 44597.7 |
| duf1870 domain-containing protein | C1I57_01710 | Not Available | - | 323754 - 324110 | 13848.5 |
| ai-2e family transporter | C1I57_01720 | Not Available | - | 324539 - 325651 | 39843.7 |
| fad-binding oxidoreductase | C1I57_01725 | Not Available | + | 325865 - 328921 | 113255.0 |
| thioesterase | C1I57_01730 | Not Available | + | 328918 - 329328 | 14924.2 |
| hypothetical protein | C1I57_01735 | Not Available | + | 329347 - 329616 | 10480.6 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism